https://www.qradiomics.com/tags/pathway/ Recent content in Pathway on Qualia Radiomics Hugo en-us Thu, 22 Jul 2021 12:57:18 -0400 https://www.qradiomics.com/posts/2021-07-22-pathcnn-interpretable-convolutional-neural-networks-for-survival-prediction-and-pathway-analysis-applied-to-glioblastoma/ Thu, 22 Jul 2021 12:57:18 -0400 https://www.qradiomics.com/posts/2021-07-22-pathcnn-interpretable-convolutional-neural-networks-for-survival-prediction-and-pathway-analysis-applied-to-glioblastoma/ <p>Jung Hun Oh, Wookjin Choi, Euiseong Ko, Mingon Kang, Allen Tannenbaum, Joseph O Deasy</p> <p>The authors wish it to be known that, in their opinion, Jung Hun Oh and Wookjin Choi should be regarded as Joint First Authors.</p> <p><a href="https://academic.oup.com/bioinformatics/article/37/Supplement_1/i443/6319702">https://academic.oup.com/bioinformatics/article/37/Supplement_1/i443/6319702</a></p> <figure> <p><a href="https://github.com/mskspi/PathCNN/raw/main/img/pathcnn.png">https://github.com/mskspi/PathCNN/raw/main/img/pathcnn.png</a></p> <figcaption> <p>An illustration of biological interpretation. (<strong>A</strong>) Grad-CAM procedure to generate class activation maps. The two images on the left bottom represent an example of the class activation maps for a sample in the cohort, which were generated from Grad-CAM procedure; (<strong>B</strong>) statistical analysis to identify significantly different pathways between the LTS and non-LTS groups. LTS, long-term survival; CNN, convolutional neural network; ReLU, rectified linear unit</p>